Here's an interesting one. I searched for an article with pictures of the distillery itself, but no luck. I assume it's the one along Tokaido Main Line (aka Kyoto Line) near Yamazaki Station, but I don't see any confirmation. Oddly, the articles I read don't have detailed information about the regions railway operations. I'll have to write to the editors :)
http://www.theguardian.com/world/2014/nov/04/suntory-time-japanese-whisky-named-worlds-best-in-sour-dram-for-scotland